Today I’m sharing my best autoimmune diet and lifestyle tips to help you boost energy, overcome brain fog, improve gut health, reduce stress, and live well naturally with autoimmune disease!
Note from Dena: This post was co- written with Sarah Kaufman, Dietetic Intern, as part of a research partnership between Back To The Book Nutrition and post-graduate nutrition students from the University of Houston.
In Part 1 of this series, we learned what causes autoimmunity and answered the question, “Why are so many more women than men getting autoimmune diseases?” Today, we’ll discuss the best autoimmune diet and holistic lifestyle tips to help you regain your health and live well with autoimmunity.
Best Autoimmune Diet + Lifestyle Tips
1. Best Autoimmune Diet: Autoimmune Protocol (AIP)
Most holistic practitioners agree that a gluten free, anti-inflammatory, whole foods diet is an absolute must for anyone diagnosed with autoimmune disease. Some autoimmune diets are geared toward specific conditions, such as the Wahl’s Protocol for Multiple Sclerosis or the Specific Carbohydrate Diet (SCD) for Crohn’s and Ulcerative Colitis.
But my go-to recommendation for autoimmune diseases, including those listed above, is the Autoimmune Protocol (AIP) diet. AIP seems to be the most helpful for the most individuals with autoimmunity, helping boost energy, overcome brain fog, reduce joint pain, and improve other autoimmune symptoms.
Just 6 weeks on the AIP diet led to autoimmune remission for 73% of participants who, prior to the study, had not achieved remission on immunosuppressive medications and other conventional medical treatments for their Irritable Bowel Disease (IBD), which includes Crohn’s Disease and Ulcerative Colitis. (2)
- Wild caught fish and shellfish
- High quality meats and organ meats
- All vegetables except nightshades (see below)
- Healthy fats (traditional animal fats like tallow and lard, olive oil, avocado oil, palm oil, coconut oil, etc.)
- All grains
- Nightshade vegetables (tomatoes, potatoes, eggplant, peppers, etc.)
- Refined sugar
- Processed oils
FAVORITE AIP RESOURCES:
- SadToAIP.com – a six week group program that helps you transition to the AIP diet
- Phoenix Helix Podcast
- The Autoimmune Wellness Handbook
- A Simple Guide to the Autoimmune Protocol
- The Autoimmune Paleo Cookbook
- The Nutrient Dense Kitchen
- PaleoOnTheGo.com – Prepared meals delivered to your door. Choose those marked “AIP”.
- ShopAIP.com – Packaged foods, snacks, condiments (entire site is AIP compliant)
Note: This post contains affiliate links. By making purchases through these links, you pay the same amount for products, but a portion of the sale will be sent my way to help with blog expenses. Thanks!
2. Fix Your Gut
We discussed Part 1 how an inflamed and “leaky gut” can allow undigested food proteins and other particles to pass through the gut lining and back into circulation, triggering the immune system to attack and increasing the likelihood that it will eventually start attacking your own body tissues.
Repairing leaky gut and addressing other infections and imbalances in the gut that made it leaky in the first place, is essential to regaining your health with autoimmune disease.
In addition to the relationship of overall gut health and leaky gut to autoimmunity, the following autoimmune conditions have been linked to overgrowth of certain gut microbes. All of the microbes below are tested for on the GI-MAP comprehensive stool test that I (Dena) run for clients.
AUTOIMMUNE CONDITIONS LINKED TO GUT MICROBES (5):
- Hashimoto’s Thyroiditis: Blastocystis hominis, Yersinia, H.pylori, Epstein Barr Virus (EBV)
- Graves’ Disease: Yersinia, H.pylori
- Rheumatoid Arthritis: Citrobacter, Klebsiella, and Proteus
- Psoriatic Arthritis: Citrobacter, Klebsiella, and Proteus
- Ankylosing spondylitis: Salmonella, Citrobacter, Klebsiella, Proteus
- Inflammatory Bowel Disease (IBD), including Crohn’s and Ulcerative Colitis: Cytomegalovirus, Klebsiella
- PANDAS (Pediatric Autoimmune Neuropsychiatric Disorders Associated with Streptococcal Infections): Streptococcus
- Autoimmunity in general: E.coli and Proteus
HOW TO FIX YOUR GUT WITH AUTOIMMUNE DISEASE:
- Switch to an anti-inflammatory whole foods diet, ideally one that is gluten free, dairy free, and with minimal sugar intake. (1)
- Go a step further and adopt a diet specific for autoimmunity, such as AIP.
- Eat in a relaxed environment and chew your food well to stimulate more “digestive juices” (stomach acid, enzymes, etc.) that help your body break down and absorb your food.
- Manage your stress since chronic stress decreases digestive juices, giving way to overgrowth of yeast and bacteria. More on stress below.
- Optimize your sleep since enough good quality sleep is critical for optimal gut health. More on sleep below.
- Get a comprehensive stool test so that specific pathogens, infections, and over-growths can be identified and corrected.
3. Get Proper Sleep + Rest
Sleep and rest are two different things, and both are important for feeling your best with autoimmune disease. Overnight sleep is like a good diet, and daytime naps and rest are like vitamins to supplement your diet.
During overnight sleep, our immune system is actively fighting off infection, lowering inflammation, balancing Th1 and Th2 activity (which is imbalanced in autoimmune disease), and calming our HPA-axis (which helps regulate stress response and is often imbalanced in autoimmune disease). (4) Most people with autoimmunity find they need more sleep than they did before their diagnosis.
Scheduling naps when needed, and carving out time for rest, relaxation, and leisure can also help immensely with fatigue and other autoimmune symptoms, especially if you have a hard time getting enough or good quality sleep overnight. Just be sure your napping doesn’t interrupt your overnight sleep.
4. Reduce + Manage Your Stress
Stress is your body’s way of responding to any kind of demand or threat, and may play a role in the development of autoimmune disease. This can include physical stresses (i.e., poor blood sugar control, illness, gut dysfunction, etc.) as well as emotional stresses (i.e., trauma, demanding schedules, exciting life events). (3)
Remember that autoimmunity itself is a constant physical stress on the body, so those with autoimmune conditions will need to work harder to reduce stress in other areas of life in order to feel well.
MANAGE STRESS BY:
- Saying “no” to unnecessary commitments
- Taking “breath breaks” throughout the day – try the 4-7-8 breathing technique to lower stress
- Establishing consistent sleep schedule & bedtime routines
- Napping when needed
- Practicing daily prayer, journaling, meditation, etc.
- Setting healthy boundaries in relationships
- Exercising, but not too much (more below)
- Enjoying hobbies
- Eating a nutrient dense diet – our stress response is dependent on nutrients
- Balancing blood sugar
- Addressing underlying illnesses, gut imbalances, etc. that put stress on the body
5. Support Proper Immune Function
Your body’s immune system is a network of cells, tissues, and organs that work together to protect the body. In autoimmune disease, wires have gotten crossed and the immune system attacks its own tissue, thinking it is a foreign invader. Supporting your immune system goes hand in hand with diet, gut health, and stress management since all of these directly impact immune function.
SUPPORT IMMUNE FUNCTION BY:
- Eating a nutrient dense, whole foods diet as discussed above.
- Improving gut health as discussed above.
- Minimizing stress as discussed above.
- Getting enough and good quality sleep as discussed above. Remember, you may need more sleep than others and more than you did before your autoimmune diagnosis.
- Quitting smoking – Smoking damages immune cells like T lymphocytes which kill virus infected cells.
- Practicing good hygiene to avoid contagious illnesses. The number one way to do this is by washing your hands. Avoiding common illnesses is more important for those with autoimmune conditions because it can trigger a flare-up.
- If you’ve done everything else listed here, and still aren’t getting the results you want, consider working with a practitioner who can help you explore Th1 vs Th2 dominance and adjust your foods and supplements accordingly.
6. Exercise, but not too much
Remember that exercise is a form of stress on the body, and it’s only beneficial if the body is healthy and resilient enough to recover well from it. Some people with autoimmune conditions will only be able to do gentle stretching while others may be able to engage in more vigorous exercise.
Experiment with different forms, frequency, and intensity of exercise to find a routine that adds to your energy and overall feeling of wellness, rather than depleting you. Always listen to your body, and pull back if you see an increase in fatigue or other autoimmune symptoms.
7. Balance Your Hormones
Hormones play a significant role in immune function, and hormone imbalances like those listed below can all increase inflammation and promote autoimmune activity.
- Estrogen excess
- Low progesterone
- Thyroid imbalance
- Insulin resistance
- Leptin resistance
- Cortisol imbalance
If you still have issues, it may be beneficial to work with a licensed practitioner who can help arrange functional medicine testing and create a personalized plan for optimal hormone balance and immune function.
8. Set Realistic Expectations + Expect Flares
Living with an autoimmune disease affects every aspect of life – what you used to do and what your body needs now may be very different. It’s important to take some time to establish new expectations about your energy levels, your ability to handle stress, how much sleep you need, what you eat, and the other areas discussed above.
Extend love and acceptance to yourself as you find your “new normal”, just the same as you would for a friend or a loved one with the same condition.
And remember, everyone with autoimmune disease will experience symptom flares. These aren’t a sign of weakness or failure on your part, but are just a part of living with autoimmunity. Take them as a sign to pull back, get some extra rest, and nurture your body. Over time, the more consistently you implement the guidelines discussed above, the less frequent and less severe your flares will likely be.
About the co-author
Sarah Kaufman is a Dietetic Intern at the University of Houston. She graduated with a B.S. in Human Nutrition and Dietetics at Metropolitan State University of Denver. Through her own personal struggles with nutrition she developed a passion for helping others find a balanced lifestyle in order to achieve great health.
Disclaimer: Information on this site is intended only for informational purposes and is not a substitute for medical advice. Always consult with a trusted healthcare provider before implementing significant dietary change. Read additional disclaimer info here.
1. Aaron Lerner, Yehuda Shoenfeld, Torsten Matthias. Adverse effects of gluten ingestion and advantages of gluten withdrawal in nonceliac autoimmune disease. Nutrition Reviews. https://www.ncbi.nlm.nih.gov/pubmed/29202198
2. Konijeti, G.G., et al. Efficacy of the Autoimmune Protocol Diet for Inflammatory Bowel Disease. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5647120/
3. Stojanovich L, Marisavljevich D. Stress as a trigger of autoimmune disease. US National Library of Medicine. https://www.ncbi.nlm.nih.gov/pubmed/18190880
4. Nayyab, A., et al. Human immune system during sleep. Am J Clin Exp Immunol. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5768894/
5. Diagnostic Solutions. The GI MAP Microbial Assay Plus (White Paper). https://www.diagnosticsolutionslab.com/sites/default/files/gi-map-white-paper-01-2018.pdf